Thursday, October 19, 2006

Working at Koeberg Private Nature Reserve

Tuesday, 17 Oct 2006. The first successful field day started with a trip to Koeberg Private Nature Reserve. This is a tract of about 3,000 hectares of coastal fynbos adjacent to the nuclear power plant owned by Eskom. Hilton Weston took time out from his very busy schedule to drive us out to my previous collecting sites. My new species (the sand dune one) was well past flowering, but I found some of the old inflorescences still above ground and I was able to excavate the rhizomes to collect host root samples.

Hyobanche is unique among parasitic plants in that it can form haustoria (organs of attachment) on the rhizome scales whenever a suitable host root makes contact. During my previous field season in 2004 I initiated a study to try to determine the range of host plants parasitized by Hyobanche. My approach is to sample host roots physically attached to a haustorium and use DNA sequencing to identify the host plant. I sample leaf tissues of candidate plants adjacent to the parasite and sequence those tissues as well. Even if there isn't a match for the ones collected, I can do a database search on genbank and get the ID down to genus for the host plant. It's pretty amazing that sometimes Hyobanche is in a pure stand of one potential host species, but the root attached is from a plant that's a long ways away from where the parasite is flowering. Sometimes more than one host plant is being parasitized simultaneously. It seems that shrubs in the sunflower family are favorite food sources, but Passerina, and a small grass are also parasitized. I'm still discovering the host range and this field season promises to be pretty productive in that regards.

Here's the first find of the day. This is a new species I'll be describing and naming. This is not what the plant really looks like; it's well past its flowering season. I'll have to post a good example when I have my external drive connected and can access my pictures again.

I found this on a pretty steep slope, so the digging was a bit of a challenge.






Here's the excavation hole.

















Here's a rhizome needing to be cleared of sand. A paint brush works well for loosening the sand without breaking the host root connection.












Patience is more than a virtue. Each find is essential to the study, so I don't want to waste any of the host-root connections.









Here's the payoff - nice, big, attached host roots!















Everything goes into a sample bag for later processing.











This is a habitat shot showing the type of sand dune vegetation where this new species occurs.










Here are some more plants that have finished flowering. These were in vegetation that was very different from previous collections.









This is one of the ones I decided to excavate from which to sample host root tissues.











Digging in sand is relatively easy if you're not having to dig on a steep slope.










I excavate a trench around the plant and then gently remove the sand to keep the host root connections intact. This is delicate work.





After visiting the first site, we drove over the dunes and down a road to another site. What a pleasant surprise to come across a Cape Cobra crossing the road. We actually were privileged to see two separate cobras during our visit to Koeberg reserve. Here's a sequence of photos from the first encounter. I took these from the cab of the pickup truck we were in.




When we first saw this snake, it was upright with a full hood. I didn't grab my camera fast enough to snap that picture. In this one, the hood is still inflated, but the snake is slithering away toward the vegation.





This is the yellow form of the Cape Cobra. It comes in a variety colors from this beautiful golden hue to black. This beauty was about two meters in length.









Hilton tried to get it back into a hooded position, but it wanted nothing more to do with us. Most of the snakes in South Africa would much rather be away from you than bother with revealing themselves, so it's always a treat to be able to see one.






Awwh, come back and play with us!











The second field site at Koeberg is a viewpoint called, "The Hut."











There's a small population of Harveya squamosa here. This is the closest related genus to Hyobanche. One of my graduate students did his doctoral thesis on Harveya.















I wanted to take a look at the rhizome off this species to see if there was any evidence of haustoria on the rhizome bracts. Didn't see any, but there is a nice collection of secondary roots produced by the parasite. You don't see this type of situation in Hyobanche.












Here's a ragged looking specimen of the west coast form of Hyobanche sanguinea. Again, this well past its prime and not characeristic of what this species looks like.








Another excavation. Sand is easy for digging, but very abrasive to the hands.










There's a lot more than meets the eye when you excavate the plant. If I were to dig up a square meter, there would be dozens of parasite rhizomes present underground.















This is a good view of the host roots to be sampled. You can also see how dirty I get during these excavations.









The excavation hole and a view of some of the potential host plants around this specimen.










More potential species on the other side of the hole. I sampled leaves from each of these plants.










Finally, a fresh specimen. It's like going on an Easter egg hunt and finding the grand prize when you finally find a good specimen.









Here's another nice looking one. Isn't it cute???











Another specimen, another hole. Boy, am I getting good at digging. I guess my associates degree in landscape horticulture is good for something. . .








Here's an idea of how big this plant really can be. I suspect that what's left underground is about ten times this size.

















Beautiful host roots to sample. Yes!








Here's the view from The Hut. It's a nice place to see whales when the weather is calm. The wind was blowing very hard all day on Tuesday, so I was pretty severely sandblasted by the end of the day. Sand in my hair, sand in my clothes, sand in my teeth - ick!







Esprit (left) is an excellent field assistant. She's very helpful as an extra pair of hands and my memory bank. (Where did I leave my glasses???? "Dr. Wolfe, don't forget to pick up your GPS unit.")








The coastal dunes are beautiful, but somewhat challenging to climb.











Another habitat shot. Disturbance and open patches of vegetation seem to be important to the flowering of Hyobanche.








Just off the coastline is a small island swarming with sea lions. All those brown dots are sea lions basking in the sun.








On the way back to the conservation office, Hilton drove us through part of the reserve where conservation efforts are underway. This is a restoration project where rooikrans, a terrible invasive shrub, is being removed. It takes only a couple of years for the native vegation to come back once the rooikrans is destroyed.





The reserve is also stocked with wildlife. Hilton drove us near some of the animals so I could photograph them from the truck. This is a cape zebra.











A group of antelope. The large one on the right is an Eland. I think the small ones are springbok, but I may be mistaken. I'll have to look it up in my mammal field guide.










This is a small herd of wildebeest - standing in front of the power lines coming from the nuclear power plant.








Finally, here's a mother bontebok and her calf.











Back at the conservation office, I sat in the shade and processed specimens. This takes a fair bit of time - everything has to be cataloged and assigned an accession number. Tissue samples have to be collected and put into silica gel to dry.










My field notes also have to be written before I forget the details.











We pressed specimens after getting back to my guest house at Kirstenbosch botanical garden. The parasitic plants are thick and succulent, so I usually split them before putting them into a plant press. This is a healthy one.









This one doesn't look quite as nice as the other one.








Many stems are infested by stem borers, and I've found ant colonies in the dune species I've sampled. These larvae are tunneling through the succulent stem tissue. The black material is their frass. I wonder if the ants come in after the borers have made holes in the stem?







This is the split stem of the Harveya squamosa specimen sampled at Koeberg. This is a much larger and more serious stem borer infestation. At least I didn't split the larvae - that would be even more disgusting.

Dassieklip - another cool spot on the contour path

On Monday afternoon, Dennis and Gigi took us up another interesting route to the contour path. This one was up and over Dassieklip (Dassie Rock). It was too late in the day for the Dassies to be active, but we did see the mountain aloes at the site. The mist was pretty dense and the condensation was dripping from the trees. It was dusk at the time and we ended up coming down off the mountain in the dark, which is always a treat. Dennis posted more pics from the walk on his blog.

Monday, October 16, 2006

South Africa - 1st weekend in Cape Town, 2006

After the tree walk on Saturday morning, things got really busy for the weekend. I'll just post some highlights. Right now I'm working on my itinerary for the next two weeks and it looks like the schedule is filling pretty nicely. I had several meetings and lots of phone calls today to organize some fieldwork in nature reserves along with a backpacking trip up into the Hexrivierberg. That's scheduled for the last weekend of October and I'm taking a lot of hikes up the backside of Table Mountain to get ready for that trip.

Saturday afternoon was an errand day again - this time to do some shopping at the outdoors stoor to get a walking stick. I'm finding it much easier to walk up the hill using a stick for leverage and for supporting my bum knee. I found a collapsible aluminum one that is very lightweight. I may go get a second one before the backpacking trip. That evening, I had dinner with the Laidlers and a couple of the woodturners from Western Cape Woodturners Association.

On Sunday we went for an early walk up the hill and over on the contour path, then to the Waterfront to do some shopping and the afternoon was spent with Dennis and Gigi Laidler. You'll have to check Dennis' blog for those pics when he posts them.



This is one of the new sites at the waterfront since I was last here. You can see the table cloth spilling over the top of Table Mountain. That's always an indicator that some cooler weather is on its way to Cape Town.








Here's the scenic shot of the harbor next to the waterfront near the craft market.











Sea lions basking in the sun on one of the docks. These ones weren't as obnoxious as the ones hanging around the docks in Oregon.










Another local vagrant, a Hartlaub's Seagull.













And, here's another. One of many box jellyfish in the harbor. This one was over a meter long. It doesn't seem to mind the oil slick in the water.










One of the first stops was at the Waterfront Woodturners Stall in the Red Shed. This is a co-op gallery shared by several of the members from Western Cape Woodturners Association, including Dennis Laidler, Izak Cronje, Gert Ferrera, Steve Bull, Thys Carstens, Beyers Cronje, Bert Parker and Ken Turner.






Here's a view of the Waterfront Woodturners stall in Cape Town.














There's a lovely selection of different styles of woodturnings.











Here's a view of my guest house at Kirstenbosch along with the car I rented. My apartment is to the right of the car.









Here's a cute striped mouse at Kirstenbosch. They're all over the garden beds there, running under the bushes.










This restio (kind of like a grass, but not in that family) is dripping with dew early in the morning.











This is a Cape Canary. He has quite a lovely song.

















The Cape Robin is very handsome, too. This isn't a good photo of one, but they are very sleek in appearance.

















A noisy neighbor at Kirstenbosch, the Hadedah Ibis. This has a loud caw that echos through the neighborhood.







The work crew was out on Monday morning repairing one of the paths. I took this picture because of the tool in use on the left. It's a tree stump with a length of rebar. It's used for tamping the asphalt mix flat.






One last pic. I have a lot more to post from this past weekend, but it's taking too long to post, so it will have to wait until I have some free time. This is a rondavel, a Xhosa style hut that is on display at Kirstenbosch.

Saturday, October 14, 2006

An interesting tree walk with the Western Cape Woodturners

When does botany and woodturning intersect? During a hike to learn about the trees from which wood is harvested. I went along on an interesting tree walk with the Western Cape Woodturners. Dennis and Gigi Laidler hosted the walk and they are a rich source of information. Thanks, Dennis and Gigi!




On my way up to the car park I spotted this helmeted guinea fowl perched in a tree. It was making quite a lot of noise.










Here's most of the group. We walked up to the contour path and looked at lots and lots of trees along the way. I don't have very many pics of the trees, but we saw ones such as hard pear, wild peach, cape beech, cape chestnut, assagai, and many, many more.







Dennis was pretty good at sharing his knowledge with us.




















Wood lice inhabiting a stump.















Fruits of the hard pear, which isn't a pear, but the wood is very hard.












Cape Saffron showing the orange bark, which only appears in the understory.















The roots of the Cape Saffron engulfing a boulder.













A typical habitat on the flank of Table Mountain above Kirstenbosch Botanical Garden.












The group on the contour path at Skeleton Gorge waterfall.
















The falls without the people.


















Backside of a glow worm larvae.













The underside of the same.












I think this is a cypress, but I can't remember for sure. It's a tree that was sent to H. H. W. Pearson, the first director of Kirstenbosch, but it arrived after he died. So, it's planted next to his grave site.










The gravesite of Professor Pearson. He died in 1916.

















This is some very weird fungus that smells bad and probably has some interaction with insects.












You can get a perspective on the size in this picture. That brown stuff is excreted from the fungus.










We walked through a wetland area and saw one of the four Dawn Redwoods planted in the mid-1940's.










Here's a Cape Bulbul spotted up on the upper path. This little guy has a good set of lungs!
















Another Spotted Eagle Owl found in another part of the garden. We also saw the one I photographed yesterday, so we saw two of them today. Pretty cool!

Friday, October 13, 2006

Spotted at Kirstenbosch today

Today was a task day at Kirstenbosch - sorting maps, making phone calls and trying to organize next week's work. In between those times, I took a short walk through the garden and saw some more birds and other critters. The most interesting find was the Spotted Eagle Owl. I was walking along a shady path and saw a birder with a digiscope. He showed me the owl. Pretty Cool.




Here's a view of Cape Town from up on the slope at Kirstenbosch Botanical Garden.











Here's looking at you, babe.



















Why don't you come up and see me sometime?
















No? Maybe some other time then. Whooooooo.
















A different kind of spotted critter. The upper wings are completely translucent.